Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44287

Metabolite ID
P44287
Deionized mass
172.1122 Da
Average m/z
173.1199
Average RT
22.5233
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.244e-11
Glyma.16G114900 hypothetical protein NA 4Chr16:25456379–25485759 (+)1.003e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.987e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)1.871e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)5.778e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.365e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.097e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.097e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.097e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.987e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)3.192e-12
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.917e-15
Glyma.01G047100 hypothetical protein AT1G14250:AT1G14250:GDA1/CD39 nucleoside phosphatase family protein__AT1G14230:AT1G14230:GDA1/CD39 nucleoside phosphata… 1Chr01:5503526–5511806 (+)2.735e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.092e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.299e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.397e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.461e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.365e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.365e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.365e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.365e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.211e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.211e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.478e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.097e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.097e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.097e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.097e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.097e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)7.715e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.733e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.733e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.733e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.733e-11
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)6.906e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.244e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)7.31e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)2.746e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.003e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.003e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.003e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.003e-12
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)6.029e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)8.815e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.001e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.234e-13
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)4.453e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)6.796e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.527e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)4.267e-11