SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 2 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01578 3-Butene-1,2-diol 88.0524 21.418e-13
P01653 No candidate annotation 205.0036 25.118e-14
P01762 1-(2-Hydroxyethoxy)methyl-5-methyluracil 200.0769 21.79e-13
P02349 Cyclic ADP-ribose 541.0504 27.308e-16
P02352 6-Carboxymethyl-3,5-dimethyl-4-hydroxypyridin-2-ol 197.0672 23.777e-17
P02441 No candidate annotation 302.9462 21.31e-11
P02600 No candidate annotation 639.2319 28.168e-12
P02709 (4S)-4-Amino-5-[(2R)-2-amino-3-sulfanylpropanoyl]oxy-5-oxopentanoic acid 250.0620 22.467e-14
P02780 5-(3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-tridecanoic acid 248.1256 22.415e-13
P02861 Butralin 295.1493 21.226e-13