SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G062500

Description hypothetical protein

Gene interval Chr16:6099546–6105267 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features64Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1406.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

64 matching features · page 3 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12258 Tryptophyl-Cysteine 307.0987 14.108e-11
P12577 Mahaleboside 324.0847 11.69e-11
P12762 Clorobiocin 696.2097 11.841e-11
P12800 Sparfloxacin 392.1662 15.59e-11
P14029 Sparfloxacin 392.1650 19.164e-11
P14148 Cyclacillin 341.1427 13.031e-11
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 16.727e-11
P17647 Quercetin 3-sambubioside-7-glucoside 758.1981 11.013e-11
P17751 No candidate annotation 950.2653 14.224e-11
P20312 Dithizone 256.0787 13.151e-13