Overview Annotation GWAS Evidence Associated genes

P12258

Metabolite ID
P12258
Deionized mass
307.0987 Da
Average m/z
308.1064
Average RT
11.0391
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)7.974e-12
Glyma.06G307500 hypothetical protein NA 2Chr06:49621167–49623664 (+)4.772e-11
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)1.797e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)7.974e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)7.974e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.507e-12
Glyma.16G062500 hypothetical protein NA 1Chr16:6099546–6105267 (-)4.108e-11