SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G212500

Description hypothetical protein

Gene interval Chr12:37150677–37158587 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features29Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records7

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2414.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

29 matching features · page 2 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P03884 (2R,3R,4S,5R)-2-(Hydroxymethyl)-6-[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxane-3,4,5-triol 326.1201 19.493e-12
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 15.375e-11
P06274 Herbicidin E 523.1954 11.921e-11
P09497 2,5-Dimethylfuran 96.0575 13.327e-11
P12478 5,7-octadienoic acid 140.0839 14.861e-11
P18035 N-[2-(3,5-Dioxopiperazino)propyl]-N-(2-amino-2-oxoethyl)glycine 286.1288 13.986e-11
P18208 No candidate annotation 435.1449 15.598e-11
P20649 Isochamanetin 362.1091 11.944e-11
P21143 U 77802 820.2298 15.585e-11
P24984 Dynemicin A 537.1043 19.291e-11