Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18208

Metabolite ID
P18208
Deionized mass
435.1449 Da
Average m/z
436.1521
Average RT
12.7162
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)3.309e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.575e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)3.993e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)9.594e-12
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)1.397e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)6.802e-13
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)6.707e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)9.243e-13
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)9.243e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.575e-12
Glyma.01G016500 hypothetical protein AT4G25960:ABCB2:P-glycoprotein 2 1Chr01:1573790–1583422 (+)3.119e-11
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)8.534e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.083e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.946e-11
Glyma.02G125700 hypothetical protein NA 1Chr02:12589185–12591860 (-)5.726e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)5.356e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.192e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.945e-12
Glyma.03G002100 hypothetical protein AT5G01930:MAN6:Glycosyl hydrolase superfamily protein 1Chr03:211934–216522 (+)7.977e-11
Glyma.03G002400 hypothetical protein AT5G25780:EIF3B-2:eukaryotic translation initiation factor 3B-2 1Chr03:234217–238375 (-)7.977e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.258e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.417e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)1.151e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.604e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.685e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.948e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.011e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.011e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)4.412e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.374e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.365e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.365e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.365e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)7.204e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.568e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.568e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.599e-11
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.09e-12
Glyma.12G212300 hypothetical protein AT3G58710:WRKY69:WRKY DNA-binding protein 69 1Chr12:37131153–37134096 (+)1.047e-12
Glyma.12G212500 hypothetical protein NA 1Chr12:37150677–37158587 (+)5.598e-11
Glyma.12G212800 hypothetical protein NA 1Chr12:37179924–37185798 (-)2.75e-13
Glyma.12G213100 hypothetical protein AT3G20560:PDIL5-3:PDI-like 5-3__AT4G27080:PDIL5-4:PDI-like 5-4 1Chr12:37207799–37215685 (+)5.598e-11
Glyma.12G213300 hypothetical protein AT4G27100:AT4G27100:Ypt/Rab-GAP domain of gyp1p superfamily protein 1Chr12:37219675–37228348 (+)5.598e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.57e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)5.525e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)2.927e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.683e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)5.048e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)5.048e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)1.609e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)2.664e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)7.657e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)4.759e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)4.759e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.288e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.32e-15
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)9.584e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)5.047e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.577e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)3.432e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)1.672e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)7.31e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)7.31e-11
Glyma.18G027300 hypothetical protein NA 1Chr18:2049280–2053959 (-)1.193e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)3.825e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.277e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)2.387e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)6.802e-13
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)7.159e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)1.043e-12
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)9.282e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.092e-11