SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G108600

Description hypothetical protein

Gene interval Chr12:9994609–9997302 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2658Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2658 matching features · page 263 of 266

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P54955 Citronellate 170.1311 15.359e-11
P54956 Oxdralazine 213.1246 11.02e-12
P54974 5-Methyldihydroflavasperone 302.1135 13.554e-12
P54987 Dihydrobungeiquinone 406.3037 12.866e-11
P55014 Hynapene C 288.1700 14.114e-14
P55029 No candidate annotation 331.5812 12.449e-11
P55033 2R-Hydroxymethyl-3S-hydroxypyrrolidine 117.0788 11.023e-11
P55035 Monomethyl phthalate 180.0437 16.247e-12
P55051 L-2-Aminoadipate adenylate 490.1198 12.396e-12
P55082 3-(4-(2-Dimethylamino-1-methylethoxy)phenyl)-1H-pyrazolo(3,4-b)pyridine-1-acetic acid 354.1726 13.553e-11