SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G059300

Description hypothetical protein

Gene interval Chr12:4289989–4292215 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features91Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records39

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

91 matching features · page 1 of 10

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07144 Diguanosine diphosphate 708.1155 27.305e-12
P07338 Cedpht 304.1446 22.8e-12
P07959 Hexahomomethionine 233.1433 27.3e-14
P09580 Diphenylphosphine 186.0615 25.718e-14
P09738 Gelsemicine 358.1880 22.38e-11
P09739 Bromovulone I 424.1229 22.608e-12
P14552 2-Nitrophenyl acetate 181.0384 24.409e-12
P14906 Wilforsinine D 695.2550 27.109e-12
P15136 No candidate annotation 799.3134 22.694e-11
P16612 Mecillinam 325.1457 27.321e-15