Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07144

Metabolite ID
P07144
Deionized mass
708.1155 Da
Average m/z
709.1216
Average RT
9.3037
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
121
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

121 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)4.389e-14
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)5.654e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.8e-11
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)6.066e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 2Chr05:2965889–2971412 (-)5.69e-15
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)1.643e-11
Glyma.12G059300 hypothetical protein NA 2Chr12:4289989–4292215 (-)7.305e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)8.538e-21
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.011e-16
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.898e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.463e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.717e-11
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)2.294e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.996e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.122e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.242e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)5.654e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.532e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.532e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)5.942e-16
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)6.555e-12
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)2.955e-11
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)5.263e-11
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)1.851e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.741e-15
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)9.884e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.979e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)5.586e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.928e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.776e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.52e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.11e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)2.937e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.808e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.808e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.807e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.135e-15
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.135e-15
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.496e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.247e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.247e-14
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.61e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.195e-12
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)2.408e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)7.571e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.601e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.282e-14
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.601e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.601e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.282e-14
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)3.748e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)1.842e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.007e-14
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.818e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.065e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)5.622e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.354e-11
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)9.11e-12
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)9.11e-12
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)9.11e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.045e-16
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.346e-22
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.82e-20
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.692e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.692e-15
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)1.388e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.692e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.692e-15
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)4.151e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)1.216e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)1.216e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)1.216e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.972e-16
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)4.151e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.936e-15
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)3.633e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)5.308e-13
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)4.593e-11
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)5.82e-14
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.376e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.653e-13
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.653e-13
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.653e-13
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)7.127e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.582e-11
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)9.05e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)2.533e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.539e-21
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.355e-15
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)6.107e-14
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)6.102e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.425e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.717e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.095e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.157e-13
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.978e-12
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)6.526e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.337e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.57e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)6.65e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.779e-12
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)7.149e-15
Glyma.16G178800 hypothetical protein NA 1Chr16:33950003–33953968 (-)9.971e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.751e-15
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)8.878e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.054e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.054e-11
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)8.476e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)4.046e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.393e-12
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)3.441e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)7.601e-14
Glyma.18G257800 hypothetical protein NA 1Chr18:54346048–54349189 (+)3.41e-11
Glyma.18G260700 hypothetical protein NA 1Chr18:54660451–54661757 (+)8.429e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)8.173e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.571e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.436e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.436e-15
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.637e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.447e-15
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.742e-14