SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G049300

Description hypothetical protein

Gene interval Chr12:3538428–3539170 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features946Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

946 matching features · page 94 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53567 No candidate annotation 376.3157 18.613e-11
P53591 No candidate annotation 118.9513 18.181e-16
P53804 (5Z,7E,22E,24E,24bE)-(1S,3R)-26,27-dimethyl-24a,24b,24c-trihomo-9,10-seco-5,7,10(19),22,24,24b-cholestahexaene-1,3,25-triol 480.3557 12.296e-12
P54056 3,4',5,6-Tetrahydroxy-3',7-dimethoxyflavone 3-glucuronide 522.0999 13.026e-11
P54074 No candidate annotation 258.8946 12.474e-11
P54195 No candidate annotation 665.1617 13.857e-12
P54509 n2-Acetyl,n6-methyllysine 202.1324 18.441e-12
P54522 Apronal 184.1211 14.169e-11
P54622 (3E,5Z)-1,3,5-Heptatriene 94.0775 18.3e-11
P54701 6-epi-beta-Verbesinol coumarate 368.2345 19.556e-12