Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P54522

Metabolite ID
P54522
Deionized mass
184.1211 Da
Average m/z
185.1287
Average RT
31.0826
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.254e-12
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)4.53e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)5.532e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)3.154e-12
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)9.403e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.549e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.254e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.254e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)5.205e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.225e-12
Glyma.11G095000 hypothetical protein NA 1Chr11:7206492–7209711 (-)6.474e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.893e-16
Glyma.11G095600 hypothetical protein AT1G50460:HKL1:hexokinase-like 1 1Chr11:7249880–7254364 (-)5.066e-12
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.169e-11
Glyma.12G055100 hypothetical protein AT5G12900:AT5G12900:DNA double-strand break repair RAD50 ATPase 1Chr12:3988442–3991287 (-)3.865e-11
Glyma.12G059300 hypothetical protein NA 1Chr12:4289989–4292215 (-)4.025e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.171e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.171e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)4.871e-18
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)2.357e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.525e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.525e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.525e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.025e-13
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)7.188e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.076e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.158e-11
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)6.214e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.337e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.337e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)3.714e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.062e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.013e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.013e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)3.222e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)3.443e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.342e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.233e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.233e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.302e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)2.302e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.132e-12
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)6.22e-11
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)6.22e-11
Glyma.19G006200 hypothetical protein NA 1Chr19:590763–595425 (+)4.209e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)4.617e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.761e-12