SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 8 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01724 Lactulose 342.1143 17.275e-13
P01729 9-(trans-4-Hydroxy-2-buten-1-yl)adenine 205.0968 18.072e-12
P01795 benserazide 257.0969 11.432e-12
P01816 9H-Purine-9-ol 136.0401 16.767e-16
P01874 Chloroatranorin 408.0636 18.824e-11
P01910 No candidate annotation 284.5701 12.606e-12
P01926 Hyacinthacine A4 187.1208 17.529e-12
P01944 Pseudouridine 244.0707 19.072e-12
P02018 4-Hydroxyphthalate 182.0209 11.858e-12
P02038 Hyellazole 287.1326 11.735e-12