Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P02038

Metabolite ID
P02038
Deionized mass
287.1326 Da
Average m/z
288.1384
Average RT
4.8551
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 5Chr16:36933402–36938940 (+)6.321e-15
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)2.137e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 3Chr16:36943073–36948828 (+)1.016e-13
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.608e-13
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)5.195e-14
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 2Chr06:48170133–48173010 (-)3.94e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.697e-12
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)3.777e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.207e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.207e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.316e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)2.627e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.88e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.995e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.608e-13
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)7.914e-12
Glyma.02G203800 hypothetical protein AT4G30935:WRKY32:WRKY DNA-binding protein 32 1Chr02:38920714–38930381 (+)2.92e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)5.98e-15
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.242e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.999e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.921e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.214e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.213e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.448e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.448e-11
Glyma.06G203800 hypothetical protein NA 1Chr06:19090082–19094822 (-)9.136e-11
Glyma.06G293700 hypothetical protein AT2G20740:AT2G20740:Tetraspanin family protein 1Chr06:48253149–48265560 (+)3.334e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)3.691e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.705e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.705e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.705e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.705e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.057e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)1.019e-16
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.832e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.735e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.735e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.735e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.735e-12
Glyma.11G008600 hypothetical protein AT5G16680:AT5G16680:RING/FYVE/PHD zinc finger superfamily protein 1Chr11:596553–605827 (+)3.317e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.861e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.861e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.868e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)8.013e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.096e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.096e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.207e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.547e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)1.366e-12
Glyma.15G232600 hypothetical protein NA 1Chr15:43719004–43723574 (+)5.767e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.666e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.86e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)7.316e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.137e-11
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)8.769e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.501e-12
Glyma.16G208100 hypothetical protein AT5G23530:CXE18:carboxyesterase 18 1Chr16:36776806–36778169 (+)1.215e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)1.058e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)6.321e-15
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.016e-13
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 1Chr18:13141007–13143331 (-)9.522e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)2.028e-12
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)4.585e-11
Glyma.19G195600 hypothetical protein AT3G52570:AT3G52570:alpha/beta-Hydrolases superfamily protein 1Chr19:45273343–45277374 (-)7.887e-11
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 1Chr20:34184591–34191923 (+)4.288e-11