SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 3 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00574 No candidate annotation 587.0511 11.415e-11
P00636 No candidate annotation 157.9538 11.824e-18
P00638 D-Apiose 150.0524 11.947e-12
P00669 Phyllanthusmin C 512.1229 11.848e-13
P00715 Loviride 350.0610 13.319e-14
P00749 4(3H)-Quinazolinone, 2-ethyl-3-(o-tolyl)- 264.1257 18.678e-12
P00757 NAC-Diketide 307.0886 15.183e-12
P00778 Nicotinamide 122.0460 13.125e-11
P00779 2-Methylthio-N6-(delta2-isopentenyl)adenosine 381.1432 11.599e-13
P00788 Tyrphostin B42 294.0991 11.484e-15