SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 189 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P53552 Antibiotic KA 7367B 200.1542 19.555e-11
P53555 Alloeremophilone 218.1663 11.362e-13
P53574 Glycyl-prolyl-arginyl-valyl-valyl-glutamic acid 655.3649 13.523e-13
P53777 Bacillisporin E 532.1106 11.062e-11
P53802 Garciduol A 486.1037 11.743e-11
P53833 TMC-66 527.1278 13.456e-12
P53875 No candidate annotation 609.2621 11.926e-12
P53884 Orthosiphol J 612.2585 17.263e-11
P53903 Actinonin 385.2587 11.071e-12
P53922 No candidate annotation 201.9865 13.625e-13