SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 183 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50979 No candidate annotation 261.2154 14.47e-12
P51058 DG(22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)/20:0/0:0) 728.5564 15.84e-14
P51133 No candidate annotation 307.2851 19.893e-12
P51162 Cephalosporin P1 574.3490 13.862e-11
P51189 Methyl ent-16-methoxy-6-oxo-7,13E-labdadien-15-oate 362.2429 14.598e-11
P51262 Shizukaol L 648.2633 12.685e-11
P51321 Aspernigrin B 456.1702 17.006e-13
P51355 1-(11S-acetoxyoctadecanoyl)-2,3-diacetyl-sn-glycerol 500.3305 16.924e-15
P51358 Leupeptin 426.2956 11.049e-11
P51427 11E,14E-Octadecadienal 264.2418 12.106e-11