SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 176 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P48506 No candidate annotation 235.1620 11.476e-11
P48556 4-hexadecynoic acid 252.2064 16.313e-12
P48575 Isoiresin 266.1500 17.165e-11
P48607 No candidate annotation 635.1950 14.695e-11
P48689 No candidate annotation 555.3748 14.492e-11
P48694 4,4-Difluoro-17beta-hydroxy-17alpha-methyl-androst-5-en-3-one 338.2064 11.483e-11
P48704 No candidate annotation 341.2094 15.045e-12
P48705 No candidate annotation 497.3679 13.562e-11
P48760 Pentagynine 405.2527 19.207e-11
P48807 Albocycline M-1 324.1985 11.389e-11