SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 156 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42521 Pirmenol 338.2406 12.918e-11
P42603 No candidate annotation 463.1322 11.051e-11
P42713 5-(3',4',5'-Trihydroxyphenyl)-gamma-valerolactone 224.0681 12.889e-12
P42729 1-(6Z,9Z,12Z-octadecatrienoyl)-2-(5Z,8Z,11Z,14Z,17Z-eicosapentaenoyl)-glycero-3-phospho-(1'-myo-inositol) 878.4971 12.251e-12
P42742 No candidate annotation 406.0716 15.05e-11
P42797 N-(36-(9Z,12Z-octadecadienoyloxy)-hexatriacontanoyl)-6R-hydroxy-sphing-4E-enine 1112.0509 14.797e-12
P42810 Argeloside N 1098.5621 18.525e-11
P42856 No candidate annotation 547.7410 12.428e-11
P42864 CDP-DG(20:2(11Z,14Z)/PGD1) 1103.5558 15.063e-12
P42876 Curassavioside D1 1020.5233 13.198e-14