P42864
Metabolite ID
P42864
Deionized mass
1103.5558 Da
Average m/z
1104.5568
Average RT
21.6826
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
122
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
122 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 3.187e-12 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 3.619e-11 | |
| Glyma.16G114900 | hypothetical protein | NA | 3 | Chr16:25456379–25485759 (+) | 5.465e-12 | |
| Glyma.16G147900 | hypothetical protein | NA | 3 | Chr16:30864919–30872425 (+) | 3.045e-12 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 2 | Chr07:1697119–1698666 (+) | 2.269e-11 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 6.902e-12 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 3.642e-13 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 2.322e-14 | |
| Glyma.13G134400 | hypothetical protein | AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein | 2 | Chr13:24677399–24693129 (-) | 5.017e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.222e-12 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.222e-12 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 8.189e-12 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 7.864e-12 | |
| Glyma.16G146700 | hypothetical protein | NA | 2 | Chr16:30755899–30759360 (-) | 1.077e-15 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 3.619e-11 | |
| Glyma.01G030500 | hypothetical protein | NA | 1 | Chr01:3189212–3200277 (+) | 8.677e-11 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 7.783e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 7.062e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 2.566e-13 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 1.095e-12 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 4.929e-11 | |
| Glyma.05G034000 | hypothetical protein | AT4G03400:DFL2:Auxin-responsive GH3 family protein | 1 | Chr05:2965889–2971412 (-) | 7.897e-11 | |
| Glyma.05G137500 | hypothetical protein | NA | 1 | Chr05:33012282–33015297 (-) | 3.881e-12 | |
| Glyma.05G137600 | hypothetical protein | NA | 1 | Chr05:33018107–33020120 (-) | 7.261e-12 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 2.407e-12 | |
| Glyma.05G223100 | hypothetical protein | AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein | 1 | Chr05:40259388–40262641 (+) | 6.914e-11 | |
| Glyma.05G224500 | hypothetical protein | NA | 1 | Chr05:40342583–40345336 (+) | 5.918e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.443e-13 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 3.185e-13 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.329e-19 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 5.701e-13 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 8.446e-11 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 2.368e-14 | |
| Glyma.06G317900 | hypothetical protein | AT5G51400:AT5G51400:PLAC8 family protein | 1 | Chr06:50645095–50649256 (+) | 7.767e-12 | |
| Glyma.07G015700 | hypothetical protein | AT1G79750:NADP-ME4:NADP-malic enzyme 4 | 1 | Chr07:1244977–1251198 (-) | 5.283e-12 | |
| Glyma.07G021700 | hypothetical protein | NA | 1 | Chr07:1684537–1692320 (+) | 5.394e-11 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 6.902e-12 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 1 | Chr08:9435391–9437279 (+) | 6.902e-12 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 6.902e-12 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 6.902e-12 | |
| Glyma.08G150100 | hypothetical protein | AT2G44450:BGLU15:beta glucosidase 15 | 1 | Chr08:11525692–11536927 (+) | 1.001e-11 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 8.945e-11 | |
| Glyma.08G210200 | hypothetical protein | NA | 1 | Chr08:17010526–17012557 (+) | 5.039e-11 | |
| Glyma.08G210300 | hypothetical protein | NA | 1 | Chr08:17011623–17012548 (-) | 5.039e-11 | |
| Glyma.08G211800 | hypothetical protein | NA | 1 | Chr08:17104514–17105442 (-) | 8.864e-13 | |
| Glyma.08G338200 | hypothetical protein | NA | 1 | Chr08:45509289–45511145 (+) | 1.764e-11 | |
| Glyma.08G338600 | hypothetical protein | NA | 1 | Chr08:45522321–45523727 (-) | 1.764e-11 | |
| Glyma.08G338900 | hypothetical protein | NA | 1 | Chr08:45536950–45543029 (-) | 1.764e-11 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 6.543e-11 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 8.165e-11 | |
| Glyma.09G249500 | hypothetical protein | NA | 1 | Chr09:47056885–47062577 (+) | 6.767e-12 | |
| Glyma.09G251800 | hypothetical protein | AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein | 1 | Chr09:47220796–47224266 (+) | 1.593e-11 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 5.063e-12 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 5.063e-12 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 5.063e-12 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 5.063e-12 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 2.723e-12 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 2.704e-13 | |
| Glyma.10G238200 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 1 | Chr10:46680865–46684088 (+) | 7.666e-11 | |
| Glyma.11G037100 | hypothetical protein | AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr11:2678678–2681764 (-) | 4.146e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 8.758e-13 | |
| Glyma.11G161900 | hypothetical protein | NA | 1 | Chr11:14992307–14994409 (-) | 1.668e-12 | |
| Glyma.11G162500 | hypothetical protein | AT2G40435:AT2G40435:transcription factor SCREAM-like protein | 1 | Chr11:15087390–15090683 (-) | 1.099e-11 | |
| Glyma.11G240600 | hypothetical protein | NA | 1 | Chr11:33491895–33493311 (+) | 2.85e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 2.539e-14 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 2.539e-14 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 4.701e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 4.701e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 5.566e-15 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 5.566e-15 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 5.251e-13 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.384e-14 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 2.322e-14 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 4.27e-12 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 1.157e-11 | |
| Glyma.13G049100 | hypothetical protein | NA | 1 | Chr13:14498952–14506408 (-) | 5.712e-12 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 6.234e-16 | |
| Glyma.13G134300 | hypothetical protein | NA | 1 | Chr13:24664171–24665742 (-) | 5.017e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 6.217e-12 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 6.217e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.222e-12 | |
| Glyma.13G170600 | ALDH2B6 | aldehyde dehydrogenase family 2 member B6 | AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 | 1 | Chr13:28436396–28440865 (-) | 9.501e-11 |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 2.17e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 2.995e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 8.189e-12 | |
| Glyma.14G177500 | hypothetical protein | AT3G13620:PUT4:Amino acid permease family protein | 1 | Chr14:43740577–43742476 (-) | 2.83e-12 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 7.864e-12 | |
| Glyma.15G035600 | hypothetical protein | AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III | 1 | Chr15:2830678–2835534 (+) | 5.822e-12 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 6.101e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 9.542e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 6.101e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 6.101e-12 | |
| Glyma.16G003000 | hypothetical protein | AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein | 1 | Chr16:164584–168767 (+) | 1.43e-11 | |
| Glyma.16G003200 | hypothetical protein | NA | 1 | Chr16:172940–178668 (-) | 1.43e-11 | |
| Glyma.16G003600 | hypothetical protein | AT5G49945:AT5G49945: | 1 | Chr16:198072–202486 (-) | 1.322e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 3.187e-12 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 2.99e-11 | |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 5.465e-12 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 5.465e-12 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 5.465e-12 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 5.465e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 8.742e-13 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 3.285e-13 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 8.477e-14 | |
| Glyma.16G141300 | hypothetical protein | AT4G36710:HAM4:GRAS family transcription factor | 1 | Chr16:29937044–29939337 (+) | 4.576e-11 | |
| Glyma.16G141600 | hypothetical protein | AT5G66710:AT5G66710:Protein kinase superfamily protein__AT3G50720:AT3G50720:Protein kinase superfamily protein | 1 | Chr16:29970884–29978773 (-) | 4.576e-11 | |
| Glyma.16G144100 | hypothetical protein | NA | 1 | Chr16:30432951–30434052 (-) | 5.246e-15 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 1 | Chr16:30514629–30519598 (+) | 3.267e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 3.137e-13 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 3.137e-13 | |
| Glyma.16G146300 | hypothetical protein | NA | 1 | Chr16:30714315–30716624 (+) | 1.077e-15 | |
| Glyma.16G147000 | hypothetical protein | NA | 1 | Chr16:30773803–30777822 (-) | 1.163e-12 | |
| Glyma.16G147400 | hypothetical protein | NA | 1 | Chr16:30817535–30821568 (+) | 9.778e-12 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 1.415e-12 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 1.415e-12 | |
| Glyma.18G033800 | hypothetical protein | NA | 1 | Chr18:2600457–2604130 (+) | 4.266e-11 | |
| Glyma.18G112600 | hypothetical protein | NA | 1 | Chr18:13398219–13405422 (+) | 5.056e-11 | |
| Glyma.18G201700 | hypothetical protein | NA | 1 | Chr18:48175554–48180264 (+) | 8.846e-11 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 7.938e-12 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 1.066e-11 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 9.096e-11 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 8.727e-15 |