SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G079800

Description hypothetical protein

Gene interval Chr10:9223520–9228511 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1939Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records5

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0026.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1939 matching features · page 147 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P39358 5,6-Dehydroalbine 230.1386 11.1e-13
P39464 Arginylvaline 273.1778 11.217e-11
P39519 No candidate annotation 439.3496 14.835e-12
P39654 1-Acetyl-3-carboxy-beta-carboline 254.0699 11.864e-13
P39690 No candidate annotation 570.7453 16.616e-13
P39693 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2408 17.276e-12
P39698 Pseudotrienic acid B 518.3368 11.902e-11
P39700 Minutoside A 662.3230 12.479e-13
P39703 N-(12S-hydroxy-5Z,8Z,10E,14Z-eicosatetraenoyl)-alanine 391.2693 17.673e-11
P39722 Pellynol H 510.3657 12.629e-13