SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.10G028500

Description hypothetical protein

Gene interval Chr10:2476846–2478953 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features477Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

477 matching features · page 10 of 48

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13108 Bms-707035 410.1081 12.875e-12
P13119 3-(Cyclohexylamino)-2-hydroxy-1-propanesulfonic acid 237.1033 14.134e-11
P13374 N-(1-Deoxy-1-fructosyl)histidine 317.1232 15.751e-11
P13392 1,5-Secovibralactone 208.1077 16.385e-11
P13500 15alpha-acetoxy-16beta,17beta-epoxy-6beta,14beta-dihydroxy-1-oxo-2alpha,5alpha-dioxy-witha3,24-dien-26,22-olide 558.2473 13.094e-11
P13624 OR-1896 245.1148 14.544e-12
P13647 No candidate annotation 982.2182 11.466e-12
P13824 (2S)-2-Amino-3-[4-[(2S)-2-amino-3-(1H-indol-3-yl)propanoyl]oxyphenyl]propanoic acid 367.1509 13.566e-17
P13826 Esmeraldic acid 518.1596 13.825e-12
P13827 (3-Nitrobenzoyl)alanine 238.0564 11.889e-13