SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G275100

Description hypothetical protein

Gene interval Chr09:49079101–49084269 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G08760:ATSIK:Protein kinase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features606Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

606 matching features · page 34 of 61

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28286 Methyl taboganate 234.0876 12.92e-11
P28366 Sophorophenolone 298.0461 13.425e-12
P28437 Fuscinarin 264.0988 17.288e-12
P28533 Ageratoside B1 988.4882 14.672e-12
P28553 Glycyl-l-histidyl-l-lysine 340.1863 13.844e-12
P28558 No candidate annotation 400.6988 11.596e-11
P28666 11-Hydroxyaclacinomycin X 840.3304 12.367e-12
P28673 3-((8Z,11E,13Z)-pentadeca-8,11,13-trien-1-yl)benzene-1,2-diol 314.2288 15.549e-11
P28775 N-Acetyl-7-O-acetylneuraminate 351.1174 12.216e-13
P28936 No candidate annotation 505.2470 17.077e-11