SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G253900

Description hypothetical protein

Gene interval Chr09:47359742–47364806 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features700Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

700 matching features · page 5 of 70

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P02878 5-Methylthio-D-ribose 180.0455 16.789e-12
P03046 (2S)-2-{[1-(R)-Carboxyethyl]amino}pentanoate 189.1037 15.662e-11
P03404 3-(1-Pyrrolidinyl)-2-butanone 141.1151 11.841e-11
P03770 Kinetin riboside 347.1228 15.157e-11
P03825 1,2-(dioctanoyl)-sn-glycero-3-phospho-(1'- myo-inositol-4',5'-bisphosphate) 746.2092 18.37e-11
P03834 No candidate annotation 120.0280 11.606e-11
P03942 1-Phenyl-1-cyclohexene 158.1076 12.56e-13
P03962 18-hydroxyjaconine 403.1426 17.293e-11
P03976 Dilmapimod 456.1404 12.609e-11
P03998 No candidate annotation 541.6502 19.604e-11