Overview Annotation GWAS Evidence Associated genes

P03998

Metabolite ID
P03998
Deionized mass
541.6502 Da
Average m/z
542.6606
Average RT
7.9259
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
33
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

33 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.002e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.474e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.474e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)8.537e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.979e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)3.953e-11
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)5.823e-12
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)5.823e-12
Glyma.05G165700 hypothetical protein NA 1Chr05:35623150–35631179 (-)1.813e-11
Glyma.05G165800 hypothetical protein NA 1Chr05:35633857–35645843 (-)1.813e-11
Glyma.05G169100 hypothetical protein NA 1Chr05:35959241–35961911 (+)2.538e-13
Glyma.05G169700 hypothetical protein NA 1Chr05:36006723–36008584 (+)6.876e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.228e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.751e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.884e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)5.071e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)6.932e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)6.804e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)9.604e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)9.604e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.027e-11
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)2.976e-12
Glyma.14G135100 hypothetical protein AT4G31540:EXO70G1:exocyst subunit exo70 family protein G1 1Chr14:23623422–23626499 (-)2.63e-11
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)3.298e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.002e-12
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.936e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.786e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.207e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.931e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)5.084e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.624e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.856e-11
Glyma.16G219700 hypothetical protein NA 1Chr16:37690133–37695529 (-)4.96e-11