Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P05636

Metabolite ID
P05636
Deionized mass
337.0949 Da
Average m/z
338.1006
Average RT
8.7961
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G106200 hypothetical protein NA 3Chr16:21463300–21469532 (+)6.903e-12
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 3Chr19:5178930–5212367 (+)4.795e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.146e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 2Chr16:21495147–21497932 (+)6.903e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.346e-11
Glyma.01G021000 hypothetical protein NA 1Chr01:2122589–2125447 (+)7.718e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)9.77e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)9.77e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)9.77e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)8.895e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.23e-12
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)9.035e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)8.292e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)8.604e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.604e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.226e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.512e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.512e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.512e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.275e-12
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)9.096e-11
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)5.947e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)8.967e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.642e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)8.967e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)8.967e-12
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.642e-12
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)1.852e-11
Glyma.06G322000 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 1Chr06:51042976–51045446 (-)9.513e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.149e-11
Glyma.09G200300 hypothetical protein NA 1Chr09:42466263–42471449 (+)1.071e-11
Glyma.09G202900 hypothetical protein AT5G10560:AT5G10560:Glycosyl hydrolase family protein 1Chr09:42685911–42690981 (-)5.679e-13
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)8.69e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)8.637e-12
Glyma.10G257500 hypothetical protein NA 1Chr10:48386988–48389180 (-)7.516e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.921e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.146e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.569e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)4.487e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.346e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.203e-12
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)3.001e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)6.116e-11
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)4.795e-11
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)4.795e-11
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)4.795e-11
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)4.795e-11