SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G058900

Description hypothetical protein

Gene interval Chr09:5397968–5404650 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1562Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records111

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0711.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1562 matching features · page 52 of 157

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15956 3,4-Dihydroxy-tamoxifen 403.2174 11.782e-11
P15974 Dihydro-3-methyl-2(3H)-furanone 100.0512 12.158e-12
P16045 No candidate annotation 173.1254 11.434e-11
P16093 N1,N10-Diferuloylspermidine 497.2577 11.153e-12
P16221 Ganomastenol C 254.1849 13.504e-12
P16252 Lucuminamide 445.1621 14.51e-13
P16258 Canaliculatol 680.1951 11.59e-11
P16337 Triphyllin A 656.2395 17.498e-11
P16359 No candidate annotation 197.1097 11.076e-11
P16389 Ethyl 2-amino-3-sulfanylpropanoate 149.0518 18.878e-11