Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P16093

Metabolite ID
P16093
Deionized mass
497.2577 Da
Average m/z
498.2636
Average RT
12.1728
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.392e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.489e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)3.51e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)9.927e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.82e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.081e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.392e-13
Glyma.03G022200 hypothetical protein NA 1Chr03:2326204–2327764 (+)8.888e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.092e-14
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)9.609e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)3.349e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)6.217e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.499e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.944e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.944e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.944e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)6.944e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.91e-13
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)2.171e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)2.171e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)1.709e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.153e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)1.016e-11
Glyma.09G209200 hypothetical protein AT1G32160:AT1G32160:beta-casein (DUF760) 1Chr09:43361634–43365478 (-)6.695e-12
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)1.077e-11
Glyma.09G210700 hypothetical protein AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr09:43466944–43471858 (-)3.269e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)7.146e-15
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.845e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.51e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.793e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.793e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.793e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.391e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.807e-13
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.489e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.489e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.489e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.489e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.195e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)7.26e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.575e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.419e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.081e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.629e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.629e-13
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.106e-11