Overview Annotation GWAS Evidence Associated genes

P16258

Metabolite ID
P16258
Deionized mass
680.1951 Da
Average m/z
681.2009
Average RT
12.2210
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.128e-11
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)7.929e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.273e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.128e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.128e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)5.484e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)1.59e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.465e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.345e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.793e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.424e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.579e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.745e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.745e-11