SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G057000

Description hypothetical protein

Gene interval Chr09:5140625–5145658 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features178Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records47

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2640.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

178 matching features · page 6 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01843 piperidino 84.0807 11.048e-11
P01926 Hyacinthacine A4 187.1208 16.268e-12
P02172 N-Methyl-D-aspartic acid 147.0545 15.281e-12
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 11.882e-11
P02554 Hygrocin B 507.1927 18.192e-12
P02676 1,4,10,13-Tetraoxa-7,16-diazacyclooctadecane 262.1869 17.984e-11
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 19.417e-12
P03721 Ofloxacin 361.1474 13.8e-11
P04032 Methyl 6-methyl-3-(2-methylpropyl)-4-(3-nitrophenyl)-4,7-dihydrothieno[2,3-b]pyridine-5-carboxylate 386.1272 11.319e-11
P04784 Amorphigenin 410.1402 12.462e-11