Overview Annotation GWAS Evidence Associated genes

P02172

Metabolite ID
P02172
Deionized mass
147.0545 Da
Average m/z
148.0609
Average RT
4.9807
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)1.072e-12
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)2.111e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.477e-13
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)6.267e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)6.557e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)5.281e-12
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)5.281e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.56e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.396e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)4.504e-13
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)7.751e-13
Glyma.10G266400 hypothetical protein NA 1Chr10:48984735–48993690 (+)4.949e-12
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)4.214e-11
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)1.676e-12
Glyma.16G042100 hypothetical protein NA 1Chr16:3931670–3933390 (-)8.682e-12
Glyma.16G042200 hypothetical protein AT2G23840:AT2G23840:HNH endonuclease 1Chr16:3933842–3940818 (+)8.682e-12
Glyma.16G042600 hypothetical protein AT5G18230:AT5G18230:transcription regulator NOT2/NOT3/NOT5 family protein 1Chr16:3964264–3976083 (-)2.351e-11
Glyma.16G042700 hypothetical protein AT1G08570:ACHT4:atypical CYS HIS rich thioredoxin 4 1Chr16:3982381–3984873 (-)6.053e-12
Glyma.17G219300 hypothetical protein AT1G48270:GCR1:G-protein-coupled receptor 1 1Chr17:37088115–37094715 (+)9.1e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)7.105e-11
Glyma.18G056300 hypothetical protein AT1G16870:AT1G16870:mitochondrial 28S ribosomal protein S29-like protein 1Chr18:4923367–4930055 (-)3.16e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)3.807e-12
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)3.807e-12
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)3.807e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)5.826e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)4.813e-11