SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G057000

Description hypothetical protein

Gene interval Chr09:5140625–5145658 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features178Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records47

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2640.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

178 matching features · page 14 of 18

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34777 No candidate annotation 311.2896 11.065e-11
P35728 4-Phenylbutanoylcarnitine 307.1834 18.474e-11
P36805 a-Methyldopamine 167.0947 14.533e-11
P37556 No candidate annotation 807.4435 18.83e-11
P37887 Starch acetate 306.0940 14.645e-11
P39018 Inermoside 970.5111 15.198e-11
P39464 Arginylvaline 273.1778 18.81e-11
P39839 No candidate annotation 223.1261 13.341e-11
P39884 Tyrianthinic acid I 1056.5675 15.363e-11
P40696 PA(8:0/10:0) 452.2512 15.908e-11