P39884
Metabolite ID
P39884
Deionized mass
1056.5675 Da
Average m/z
1057.5625
Average RT
19.7990
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.13G183400 | hypothetical protein | NA | 2 | Chr13:29666942–29670201 (+) | 1.003e-11 | |
| Glyma.05G164700 | hypothetical protein | NA | 1 | Chr05:35543931–35549196 (-) | 3.01e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 3.278e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.597e-11 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.43e-13 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 8.393e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 1 | Chr06:50401945–50408153 (+) | 5.87e-11 | |
| Glyma.07G136100 | hypothetical protein | NA | 1 | Chr07:16113273–16117600 (+) | 4.074e-11 | |
| Glyma.09G057000 | hypothetical protein | NA | 1 | Chr09:5140625–5145658 (+) | 5.363e-11 | |
| Glyma.09G057300 | hypothetical protein | AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein | 1 | Chr09:5164998–5171598 (-) | 3.855e-11 | |
| Glyma.10G081700 | hypothetical protein | NA | 1 | Chr10:9752508–9758422 (+) | 5.672e-11 | |
| Glyma.12G049300 | hypothetical protein | NA | 1 | Chr12:3538428–3539170 (-) | 9.636e-12 | |
| Glyma.13G181100 | hypothetical protein | AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein | 1 | Chr13:29426889–29433599 (-) | 4.399e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 3.57e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 5.118e-11 | |
| Glyma.18G045700 | hypothetical protein | NA | 1 | Chr18:3956176–3958846 (+) | 1.807e-11 | |
| Glyma.18G251000 | hypothetical protein | NA | 1 | Chr18:53738009–53740714 (+) | 6.744e-11 |