Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35728

Metabolite ID
P35728
Deionized mass
307.1834 Da
Average m/z
308.1887
Average RT
17.9076
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.892e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.137e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.565e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.98e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.664e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.664e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.664e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.664e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.664e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.664e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.664e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.892e-11
Glyma.02G115700 hypothetical protein AT1G26500:AT1G26500:Pentatricopeptide repeat (PPR) superfamily protein 1Chr02:11265298–11266785 (-)4.034e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)5.021e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.432e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.112e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.152e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.264e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.445e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.445e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.891e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.789e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.789e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.789e-13
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)1.594e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.394e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)6.523e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.415e-13
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)5.453e-13
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)5.453e-13
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)4.213e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)8.474e-11
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)8.474e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)2.488e-12
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.797e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)8.565e-14
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)1.628e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.732e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.365e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)1.206e-12
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)8.303e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)8.872e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.692e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.66e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.66e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.66e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.66e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.073e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.061e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.061e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.061e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.481e-11
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 1Chr15:3812816–3815263 (+)3.029e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.015e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.988e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.6e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.468e-13
Glyma.16G116300 hypothetical protein AT4G35570:HMGB5:high mobility group B5__AT2G17560:HMGB4:high mobility group B4 1Chr16:25905311–25906957 (-)3.172e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)8.072e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.051e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.026e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.925e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)5.759e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.869e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.574e-12
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)7.642e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.125e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)1.51e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)1.191e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)5.846e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)7.945e-11
Glyma.18G056300 hypothetical protein AT1G16870:AT1G16870:mitochondrial 28S ribosomal protein S29-like protein 1Chr18:4923367–4930055 (-)3.608e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)2.829e-12
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)2.829e-12
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)2.829e-12
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 1Chr18:6873417–6878947 (-)7.669e-12
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)5.273e-13