SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 94 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47930 PS(24:0/16:0) 847.6377 15.303e-11
P47940 Daphniyunnine D 341.2021 15.098e-11
P48184 PC(2:0/20:3(5Z,11Z,14Z)-O(8,9)) 601.3301 16.458e-12
P49571 Olopatadine n-oxide 353.1566 13.173e-12
P49915 (6Z,8Z)-Hexadeca-6,8-dienedioylcarnitine 425.2704 12.889e-11
P49988 Rifamycin W-hemiacetal 653.2891 15.443e-11
P50255 Avermectin B2b monosaccharide 732.4084 11.082e-11
P50489 10-Hydroxy-cadin-4-en-3-one 236.1742 14.49e-11
P50794 No candidate annotation 350.2609 17.068e-11
P52537 Mycotoxin T 2 341.1479 12.5e-11