SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 68 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24642 Z-Gly-Gly-Arg-AMC 579.2417 22.168e-11
P25116 2,3,4,2',4',6'-Hexamethoxychalcone 388.1529 28.934e-12
P25118 Benzylpenicilloyl 350.1332 28.662e-11
P25358 Scutebarbatine E 571.2292 29.456e-11
P25374 Bisnor-(+)-S-145 349.1461 27.159e-11
P25817 Globuloside A 890.2955 22.285e-11
P25859 Zalypsis 709.2569 27.559e-11
P26326 No candidate annotation 277.6307 22.708e-11
P26433 NS 1608 330.0383 22.354e-11
P26481 4,5,6,7-Tetrahydroxydecyl glucosinolate 509.1178 26.991e-11