SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 63 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10485 No candidate annotation 659.2251 29.288e-11
P10507 No candidate annotation 529.2562 23.88e-11
P10934 Asperuloide C 602.2568 25.179e-11
P11263 Psilostachyin C 264.1332 29.118e-11
P11295 3,5-Dihydroxyphenyl 1-O-(6-O-galloyl-beta-D-glucopyranoside) 440.0962 23.069e-11
P11433 No candidate annotation 651.1760 28.226e-13
P11505 No candidate annotation 242.1593 25e-11
P11538 L-Serine 105.0414 26.628e-11
P11923 Tyr-Val-Ala-Asp-chloromethyl ketone 498.1859 28.843e-11
P12150 Epicoccin H 486.1050 28.134e-11