Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11433

Metabolite ID
P11433
Deionized mass
651.1760 Da
Average m/z
652.1848
Average RT
10.7863
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.405e-13
Glyma.13G224800 hypothetical protein NA 3Chr13:33748627–33756494 (-)4.727e-11
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)8.226e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.094e-11
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 2Chr16:30388030–30390647 (-)7.967e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)1.706e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)2.779e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.405e-13
Glyma.20G021900 hypothetical protein AT5G37340:AT5G37340:ZPR1 zinc-finger domain protein 2Chr20:2227480–2247807 (+)7.956e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)2.14e-11
Glyma.20G112600 hypothetical protein AT5G04310:AT5G04310:Pectin lyase-like superfamily protein 2Chr20:35468911–35474203 (+)5.133e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)7.472e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.185e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.772e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.772e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.772e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.102e-13
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.102e-13
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.102e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.19e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.19e-14
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.929e-14
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)8.053e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)7.165e-14
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.495e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.315e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)9.161e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)9.135e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)9.135e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.254e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.305e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.305e-12
Glyma.13G224300 hypothetical protein NA 1Chr13:33703380–33715996 (-)4.727e-11
Glyma.13G224500 hypothetical protein AT1G29750:RKF1:receptor-like kinase in flowers 1 1Chr13:33725180–33735368 (+)6.648e-11
Glyma.14G198600 hypothetical protein NA 1Chr14:46360801–46362778 (+)1.914e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)4.59e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.27e-14
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)8.059e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)3.164e-15
Glyma.16G142800 hypothetical protein AT2G23760:BLH4:BEL1-like homeodomain 4 1Chr16:30201467–30210093 (+)8.91e-11
Glyma.16G143100 hypothetical protein AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 1Chr16:30245352–30261255 (-)8.91e-11
Glyma.16G143200 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 1Chr16:30273151–30278680 (+)8.91e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)1.934e-16
Glyma.16G143600 hypothetical protein AT3G50820:PSBO2:photosystem II subunit O-2 1Chr16:30379885–30382483 (-)8.91e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.13e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.902e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.902e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.157e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.199e-12
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)5.413e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)1.693e-11
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 1Chr18:50714270–50723555 (-)5.931e-12
Glyma.18G220300 hypothetical protein NA 1Chr18:50719690–50720509 (-)5.931e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.249e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.673e-17
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.673e-17
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.097e-11
Glyma.20G021600 PT12 AT1G20860:PHT1;8:phosphate transporter 1;8__AT1G76430:PHT1;9:phosphate transporter 1;9 1Chr20:2196534–2205616 (+)3.176e-11
Glyma.20G022000 hypothetical protein NA 1Chr20:2262949–2267229 (+)7.956e-11
Glyma.20G022500 hypothetical protein NA 1Chr20:2342943–2353164 (+)3.937e-11
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 1Chr20:4655939–4664465 (-)2.726e-13
Glyma.20G058300 hypothetical protein AT2G31340:emb1381:embryo defective 1381 1Chr20:17536634–17556845 (-)1.604e-11
Glyma.20G058500 hypothetical protein AT5G35690:AT5G35690:zinc metalloproteinase-like protein 1Chr20:17704024–17732890 (-)1.604e-11
Glyma.20G058600 hypothetical protein NA 1Chr20:17714996–17723526 (-)1.604e-11
Glyma.20G058900 hypothetical protein NA 1Chr20:17856607–17870302 (-)1.604e-11
Glyma.20G059000 hypothetical protein AT4G12650:AT4G12650:Endomembrane protein 70 protein family 1Chr20:17864634–17867799 (+)1.604e-11
Glyma.20G060000 hypothetical protein AT2G04360:AT2G04360:uncharacterized protein 1Chr20:18396137–18402016 (+)1.604e-11
Glyma.20G061600 hypothetical protein AT4G12680:AT4G12680:uncharacterized protein 1Chr20:19167408–19171993 (-)1.604e-11
Glyma.20G061900 hypothetical protein NA 1Chr20:19276438–19277943 (-)1.604e-11
Glyma.20G062200 hypothetical protein NA 1Chr20:19517781–19521218 (-)1.604e-11
Glyma.20G064100 hypothetical protein NA 1Chr20:21538873–21551968 (+)1.604e-11
Glyma.20G065200 hypothetical protein AT4G14965:MAPR4:membrane-associated progesterone binding protein 4 1Chr20:23032161–23039465 (+)1.604e-11
Glyma.20G065700 hypothetical protein NA 1Chr20:23270247–23273003 (+)1.604e-11
Glyma.20G066100 NRP-A AT5G42050:AT5G42050:DCD (Development and Cell Death) domain protein 1Chr20:23415656–23418864 (-)1.604e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.599e-11