SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 60 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01539 Clitidine 270.0864 25.874e-11
P01733 4'-N-desmethylolanzapine 298.1240 24.273e-11
P03571 Carmofur 257.1227 23.176e-11
P04030 Aurantiomide B 358.1659 24.507e-11
P04039 Pefloxacin 333.1503 22.315e-12
P04078 No candidate annotation 311.5769 22.074e-11
P04238 2-Caffeoylisocitrate 354.0591 22.002e-11
P04282 Homoarbutin 286.1035 28.936e-11
P04385 5-Hydroxy-3,4,7-triphenyl-2,6-benzofurandione 392.1077 21.927e-11
P04587 Methionyl-Glutamate 278.0937 24.825e-11