Overview Annotation GWAS Evidence Associated genes

P04238

Metabolite ID
P04238
Deionized mass
354.0591 Da
Average m/z
355.0645
Average RT
8.0398
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)4.516e-13
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)2.002e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.64e-14
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)6.904e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.12e-11
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)1.278e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.654e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.674e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.307e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.995e-14
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)4.893e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.226e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.598e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.637e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)4.068e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.597e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.597e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.077e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.328e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.271e-12
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)2.016e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.818e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.197e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.197e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.284e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)9.062e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)9.062e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.27e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)9.101e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)9.101e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.704e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.297e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.297e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.072e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.897e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)9.524e-12
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)5.555e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.36e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.062e-11