SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 59 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P55256 No candidate annotation 663.1790 33.087e-12
P55270 No candidate annotation 498.7246 36.941e-12
P55372 Pentaethylene glycol 238.1414 32.208e-12
P00369 (1R,6S)-6-Amino-5-oxocyclohex-2-ene-1-carboxylate 155.0579 26.244e-11
P00389 Furamizole 288.0501 21.035e-11
P00434 Isochromophilone VIII 394.1574 21.201e-11
P00726 Ovalitenin C 322.0797 29.524e-11
P01178 1,1,1-Trifluoro-2,4-pentanedione 154.0224 27.594e-11
P01373 Muramic acid 251.0977 28.9e-11
P01414 4-Amino-4-deoxychorismate 225.0624 26.402e-11