Overview Annotation GWAS Evidence Associated genes

P00369

Metabolite ID
P00369
Deionized mass
155.0579 Da
Average m/z
156.0651
Average RT
3.2412
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)6.244e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.112e-13
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)6.151e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.56e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)4.71e-12
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)8.939e-13
Glyma.16G024700 hypothetical protein NA 1Chr16:2403095–2406034 (+)4.275e-11
Glyma.16G025000 hypothetical protein AT3G61730:RMF:reduced male fertility__AT5G36000:AT5G36000:F-box protein RMF 1Chr16:2422720–2426701 (+)4.275e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)9.7e-15
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)9.7e-15
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)1.549e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)5.557e-11