SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 52 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47438 Aspergillamide A 474.2632 36.667e-13
P47541 3R-hydroxy-14R-((1H-indol-3-ylcarbonyl)3,6-dideoxy-alpha-L-arabino-hexopyranosyloxy)-pentadecanoic acid 547.3248 37.619e-13
P47599 Miraziridine A 668.3937 33.885e-11
P47617 (15Z)-15-Nitro-3,3'-dihydroxy-beta,beta-carotene-4,4'-dione 641.3622 32.201e-12
P47769 Janthitrem F 645.3593 37.073e-12
P47903 Crepidiaside B 424.1738 33.647e-12
P48055 1-hexadecyl-2-(9Z-nonadecenoyl)-glycero-3-phospho-(1'-sn-glycerol) 748.5600 34.814e-12
P48147 2-Isopropylfuran 110.0728 38.401e-13
P48302 Ciprofloxacin 331.1327 33.891e-11
P48467 13-Apo-beta-carotenone 258.1964 33.828e-11