Overview Annotation GWAS Evidence Associated genes

P47438

Metabolite ID
P47438
Deionized mass
474.2632 Da
Average m/z
475.2724
Average RT
24.7569
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)6.667e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)6.053e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)5.519e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.079e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.079e-13
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.009e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)3.544e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.615e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)3.675e-12
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)3.675e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.643e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.643e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.643e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)9.32e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)9.32e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.158e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.522e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)8.33e-14
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.41e-11
Glyma.18G110500 hypothetical protein NA 1Chr18:13060060–13070455 (+)1.944e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.213e-12