SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 51 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46690 Nitracidomycin A 276.1310 33.961e-12
P46718 No candidate annotation 276.6279 32.892e-12
P46758 Cyclovirobuxeine F 560.3627 36.099e-13
P46773 1-hexadecanoyl-2-glutaryl-sn-glycero-3-phosphoserine 611.3067 34.906e-11
P46793 Quadranoside VIII 648.3930 31.801e-11
P46909 Racemoside B 886.4934 39.773e-12
P46914 Riparoside A 1048.5490 31.498e-12
P47078 No candidate annotation 144.0928 35.884e-12
P47118 3b,15b,17a-Trihydroxy-pregnenone 348.2285 36.795e-12
P47331 Dextromoramide 392.2491 33.503e-13