Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P46914

Metabolite ID
P46914
Deionized mass
1048.5490 Da
Average m/z
1049.5526
Average RT
24.4061
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
60
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

60 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)1.253e-11
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)3.168e-11
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.498e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)8.018e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.793e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr09:5571201–5579976 (-)2.349e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)2.161e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.453e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)5.581e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.076e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)8.415e-14
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)4.865e-15
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)4.865e-15
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)4.865e-15
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)4.865e-15
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)4.865e-15
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)4.865e-15
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)4.865e-15
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)8.018e-14
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)4.573e-12
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)7.568e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)7.568e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.021e-12
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)5.597e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.701e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.245e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.764e-13
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.013e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.013e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.013e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)1.124e-11
Glyma.09G052400 hypothetical protein AT1G31040:AT1G31040:PLATZ transcription factor family protein 1Chr09:4583416–4589291 (-)7.648e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)9.327e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)1.708e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)1.708e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)2.615e-11
Glyma.09G057000 hypothetical protein NA 1Chr09:5140625–5145658 (+)2.615e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)7.483e-14
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)7.672e-12
Glyma.09G059600 hypothetical protein AT4G30010:AT4G30010:ATP-dependent RNA helicase 1Chr09:5504630–5507434 (+)3.032e-11
Glyma.09G059700 hypothetical protein AT4G29940:PRHA:pathosis related homeodomain protein A 1Chr09:5513108–5520158 (+)3.032e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)5.194e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.652e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.465e-11
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)2.415e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.722e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.722e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.438e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.438e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.438e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.285e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.707e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.707e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.707e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.419e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.992e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.523e-12
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)3.331e-11
Glyma.18G213500 hypothetical protein AT2G38550:AT2G38550:Transmembrane proteins 14C 1Chr18:50044567–50050213 (-)5.595e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)6.677e-12