Overview Annotation GWAS Evidence Associated genes

P46690

Metabolite ID
P46690
Deionized mass
276.1310 Da
Average m/z
277.1367
Average RT
24.2729
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
36
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

36 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)3.961e-12
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 2Chr01:50404781–50436297 (-)2.803e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.016e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.794e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.087e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.087e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.47e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.237e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.237e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.237e-14
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)8.695e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.635e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.446e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.156e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.027e-12
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)1.539e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)1.539e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)2.677e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)9.084e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)5.265e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.054e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.054e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.054e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.054e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.166e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.057e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.686e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)7.686e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)7.686e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.446e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.499e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.434e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.402e-12
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)6.755e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)7.681e-12
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)4.35e-11