SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 2 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01915 Cardiospermin 275.0986 32.753e-12
P01926 Hyacinthacine A4 187.1208 32.964e-12
P01944 Pseudouridine 244.0707 35.318e-11
P02515 2,5-Dimethyl-3-furanthiol acetate 170.0374 35.382e-11
P02647 Pindone 230.0948 32.315e-14
P02808 No candidate annotation 382.0185 33.327e-11
P02908 3-Hydroxy-2-methylglutaric acid 162.0513 35.19e-12
P02946 Maremycin C1 379.1215 37.166e-12
P03116 NSC 525602 184.0826 31.357e-11
P03242 S-Adenosyl-L-homocysteine 384.1215 36.338e-14