Overview Annotation GWAS Evidence Associated genes

P01915

Metabolite ID
P01915
Deionized mass
275.0986 Da
Average m/z
276.1051
Average RT
4.5618
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
156
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

156 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)7.376e-11
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.188e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.944e-11
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)2.753e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.022e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.816e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)5.116e-12
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)4.533e-11
Glyma.04G096300 hypothetical protein NA 2Chr04:8635554–8654734 (+)4.21e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 2Chr04:8887523–8888545 (-)5.086e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.17e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.17e-11
Glyma.09G042600 hypothetical protein AT5G49150:GEX2:gamete expressed 2 2Chr09:3636044–3644796 (-)2.561e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)3.865e-18
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)2.047e-16
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.64e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.768e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.422e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.422e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.487e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.211e-14
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)2.981e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1134716–1143232 (+)7.103e-11
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)1.659e-11
Glyma.01G022800 hypothetical protein AT5G65490:AT5G65490:suppressor-like protein 1Chr01:2296901–2303966 (+)7.382e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)3.918e-12
Glyma.02G044200 hypothetical protein AT5G66060:AT5G66060:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr02:4100131–4105208 (+)5.683e-11
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)6.897e-16
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.203e-13
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)3.243e-12
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)1.381e-12
Glyma.02G303600 hypothetical protein NA 1Chr02:47883626–47887124 (-)9.282e-12
Glyma.02G303700 hypothetical protein NA 1Chr02:47892900–47896207 (+)9.282e-12
Glyma.02G304000 hypothetical protein AT1G51350:AT1G51350:ARM repeat superfamily protein 1Chr02:47908136–47915999 (-)9.282e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.447e-15
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.867e-12
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)4.793e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.545e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.225e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)8.483e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.105e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)7.376e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)7.376e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)7.376e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)4.977e-11
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)5.086e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)3.956e-13
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)3.584e-14
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.937e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)8.411e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.219e-15
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)5.564e-15
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)5.564e-15
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.322e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.018e-16
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.018e-16
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.018e-16
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.787e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)5.45e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)2.658e-12
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)2.658e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)2.658e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)2.658e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.875e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.73e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.442e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)3.427e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)3.427e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.603e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.603e-16
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)2.659e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.765e-15
Glyma.06G305200 hypothetical protein AT3G21690:AT3G21690:MATE efflux family protein 1Chr06:49420013–49426780 (-)4.741e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.944e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.944e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)9.5e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)9.5e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.947e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.627e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)9.324e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.17e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.17e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)6.15e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.17e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.01e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)3.535e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)3.535e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)8.272e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.567e-13
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)8.075e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.339e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.045e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)7.964e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)4.439e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)9.541e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)9.542e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.15e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.865e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.866e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.193e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.193e-14
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.577e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.865e-18
Glyma.12G202500 hypothetical protein AT1G03600:PSB27:photosystem II family protein 1Chr12:36301835–36304669 (+)5.833e-11
Glyma.12G202700 hypothetical protein AT2G20875:EPF1:epidermal patterning factor 1 1Chr12:36329374–36330905 (-)6.842e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)9.633e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.768e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.54e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.022e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)8.879e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.194e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.193e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.422e-14
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.743e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.637e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.208e-16
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.208e-16
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.208e-16
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)3.025e-16
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)2.62e-12
Glyma.14G082300 hypothetical protein AT5G42750:BKI1:BRI1 kinase inhibitor 1 1Chr14:7130733–7132305 (+)7.824e-12
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)4.103e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)4.103e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.545e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.714e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.474e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)2.183e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.816e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.816e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.716e-14
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.353e-15
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.581e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.427e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.409e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)5.116e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.459e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.459e-13
Glyma.16G218800 hypothetical protein AT5G08335:ATSTE14B:Isoprenylcysteine carboxyl methyltransferase (ICMT) family__AT5G23320:STE14A:S-isoprenylcysteine O-m… 1Chr16:37615509–37618337 (-)3.674e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)1.349e-11
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.941e-12
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.941e-12
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)3.971e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)2.333e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)3.971e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)7.953e-11
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)6.841e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)9.201e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)8.502e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)3.887e-11
Glyma.18G267200 hypothetical protein NA 1Chr18:55161119–55166101 (-)1.472e-11
Glyma.18G267300 hypothetical protein NA 1Chr18:55166980–55168397 (+)2.67e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.652e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.652e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.959e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.789e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.169e-12