SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 19 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16635 No candidate annotation 257.1235 34.763e-11
P16665 6-Hydroxytricetin 5-glucoside 480.0943 33.021e-11
P16672 (+)-(R)-(E)-3'-Hydroxyartemidin 216.0801 31.667e-12
P16775 PA(10:0/13:0) 522.3343 37.419e-12
P16872 Methyl-4-O-caffeoylquinate 368.1086 32.142e-12
P16940 5-Methylthiopentyldesulfoglucosinolate 355.1126 38.933e-12
P16953 No candidate annotation 755.8854 33.743e-11
P17163 3',4'-Dihydroxy-7-methoxy-8-(3-methylbut-2-enyl)-2'''-(1-hydroxy-1-methylethyl)-furano-(4'',5'':6,5)favanone 452.1782 35.185e-12
P17202 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0669 36.8e-13
P17302 Candoxatrilat 399.2291 31.061e-13