SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G053800

Description hypothetical protein

Gene interval Chr09:4737413–4755632 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features949Overlap
Maximum supporting SNP records6
Features with ≥2 supporting SNP records769

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4278.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

949 matching features · page 1 of 95

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P36407 Capnosine 495.2429 64.836e-12
P00033 No candidate annotation 199.9632 31.598e-12
P00071 No candidate annotation 252.1318 31.962e-12
P00101 Filgotinib 425.1500 39.884e-13
P00159 Athidathion 329.9893 39.823e-12
P00179 No candidate annotation 189.9832 33.347e-11
P00574 No candidate annotation 587.0511 34.598e-11
P00914 Sch 38519 455.1593 31.062e-11
P01028 Lamiridosin A 260.0890 31.025e-13
P01670 (2S,3S,4S)-2-(carboxycyclopropyl)glycine 159.0501 31.836e-12